USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: RS2_HUMAN USC-OGP 2-DE database:  RS2_HUMAN RS2_HUMAN General information about the entry View entry in simple text format Entry name RS2_HUMAN Primary accession number P15880 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=40S ribosomal protein S2; AltName: Full=40S ribosomal protein S4; AltName: Full=Protein LLRep3; AltName: Full=Small ribosomal subunit protein uS5 {ECO:0000303|PubMed:24524803};. Gene name Name=RPS2 Synonyms=RPS4 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1246: pI=5.01; Mw=31502 Cross-references UniProtKB/Swiss-Prot P15880; RS2_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RS2_HUMAN Primary accession number P15880 Secondary accession number(s) B2R5G0 D3DU82 Q3MIB1 Sequence was last modified on  October 1, 1996 (version 2) Annotations were last modified on  March 15, 2017 (version 184) Name and origin of the protein Description RecName: Full=40S ribosomal protein S2; AltName: Full=40S ribosomal protein S4; AltName: Full=Protein LLRep3; AltName: Full=Small ribosomal subunit protein uS5 {ECO:0000303|PubMed:24524803}; Gene name Name=RPS2 Synonyms=RPS4 Encoded on Name=RPS2; Synonyms=RPS4 Keywords 3D-structure; Acetylation; Citrullination; Complete proteome; Direct protein sequencing; Isopeptide bond; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X17206; CAA35078.1; ALT_FRAME; mRNA EMBL AK312173; BAG35107.1; -; mRNA EMBL CH471112; EAW85592.1; -; Genomic_DNA EMBL CH471112; EAW85595.1; -; Genomic_DNA EMBL BC001795; AAH01795.1; -; mRNA EMBL BC006559; AAH06559.1; -; mRNA EMBL BC008862; AAH08862.1; -; mRNA EMBL BC010165; AAH10165.1; -; mRNA EMBL BC012354; AAH12354.1; -; mRNA EMBL BC016178; AAH16178.1; -; mRNA EMBL BC016951; AAH16951.1; -; mRNA EMBL BC018993; AAH18993.1; -; mRNA EMBL BC021545; AAH21545.1; -; mRNA EMBL BC023541; AAH23541.1; -; mRNA EMBL BC025677; AAH25677.1; -; mRNA EMBL BC066321; AAH66321.1; -; mRNA EMBL BC068051; AAH68051.1; -; mRNA EMBL BC071922; AAH71922.1; -; mRNA EMBL BC071923; AAH71923.1; -; mRNA EMBL BC071924; AAH71924.1; -; mRNA EMBL BC073966; AAH73966.1; -; mRNA EMBL BC075830; AAH75830.1; -; mRNA EMBL BC103756; AAI03757.1; -; mRNA EMBL BC105985; AAI05986.1; -; mRNA CCDS CCDS10452.1; -; . PIR S08228; S08228; . RefSeq NP_002943.2; NM_002952.3; . UniGene Hs.356366; -; . UniGene Hs.381079; -; . UniGene Hs.498569; -; . UniGene Hs.506997; -; . PDB 4UG0; EM; -; SC=1-293 PDB 4V6X; EM; 5.00 A; AC=1-293 PDB 5A2Q; EM; 3.90 A; C=1-293 PDB 5AJ0; EM; 3.50 A; BC=1-293 PDB 5FLX; EM; 3.90 A; C=1-293 PDB 5T2C; EM; 3.60 A; AJ=1-293 PDBsum 4UG0; -; . PDBsum 4V6X; -; . PDBsum 5A2Q; -; . PDBsum 5AJ0; -; . PDBsum 5FLX; -; . PDBsum 5T2C; -; . ProteinModelPortal P15880; -; . SMR P15880; -; . BioGrid 112101; 285; . IntAct P15880; 49; . MINT MINT-3008399; -; . STRING 9606.ENSP00000341885; -; . iPTMnet P15880; -; . PhosphoSitePlus P15880; -; . SwissPalm P15880; -; . BioMuta RPS2; -; . DMDM 1710756; -; . EPD P15880; -; . MaxQB P15880; -; . PaxDb P15880; -; . PeptideAtlas P15880; -; . PRIDE P15880; -; . DNASU 6187; -; . Ensembl ENST00000343262; ENSP00000341885; ENSG00000140988; . GeneID 6187; -; . KEGG hsa:6187; -; . UCSC uc002cno.3; human; . CTD 6187; -; . DisGeNET 6187; -; . GeneCards RPS2; -; . H-InvDB HIX0029256; -; . H-InvDB HIX0039223; -; . H-InvDB HIX0202579; -; . HGNC HGNC:10404; RPS2; . HPA HPA055133; -; . MIM 603624; gene; . neXtProt NX_P15880; -; . OpenTargets ENSG00000140988; -; . PharmGKB PA34806; -; . eggNOG KOG0877; Eukaryota; . eggNOG COG0098; LUCA; . GeneTree ENSGT00390000001433; -; . HOGENOM HOG000072596; -; . HOVERGEN HBG000437; -; . InParanoid P15880; -; . KO K02981; -; . OMA KRGCGSW; -; . OrthoDB EOG091G0LPC; -; . PhylomeDB P15880; -; . TreeFam TF300806; -; . Reactome R-HSA-156827; L13a-mediated translational silencing of Ceruloplasmin expression; . Reactome R-HSA-156902; Peptide chain elongation; . Reactome R-HSA-1799339; SRP-dependent cotranslational protein targeting to membrane; . Reactome R-HSA-192823; Viral mRNA Translation; . Reactome R-HSA-2408557; Selenocysteine synthesis; . Reactome R-HSA-3214858; RMTs methylate histone arginines; . Reactome R-HSA-6790901; rRNA modification in the nucleus and cytosol; . Reactome R-HSA-6791226; Major pathway of rRNA processing in the nucleolus and cytosol; . Reactome R-HSA-72649; Translation initiation complex formation; . Reactome R-HSA-72689; Formation of a pool of free 40S subunits; . Reactome R-HSA-72695; Formation of the ternary complex; and subsequently; the 43S complex Reactome R-HSA-72702; Ribosomal scanning and start codon recognition; . Reactome R-HSA-72706; GTP hydrolysis and joining of the 60S ribosomal subunit; . Reactome R-HSA-72764; Eukaryotic Translation Termination; . Reactome R-HSA-8876725; Protein methylation; . Reactome R-HSA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC); . Reactome R-HSA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC); . GeneWiki RPS2; -; . GenomeRNAi 6187; -; . PRO PR:P15880; -; . Proteomes UP000005640; Chromosome 16; . Bgee ENSG00000140988; -; . CleanEx HS_RPS2; -; . ExpressionAtlas P15880; baseline and differential; . Genevisible P15880; HS; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0045296; F:cadherin binding; IDA:BHF-UCL; . GO GO:0019899; F:enzyme binding; IPI:UniProtKB; . GO GO:0017134; F:fibroblast growth factor binding; IPI:UniProtKB; . GO GO:0003729; F:mRNA binding; IDA:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003735; F:structural constituent of ribosome; IDA:UniProtKB; . GO GO:0000184; P:nuclear-transcribed mRNA catabolic process; nonsense-mediated decay; TAS:Reactome GO GO:0051347; P:positive regulation of transferase activity; IDA:UniProtKB; . GO GO:0006479; P:protein methylation; TAS:Reactome; . GO GO:0006364; P:rRNA processing; TAS:Reactome; . GO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome; . GO GO:0006412; P:translation; IC:UniProtKB; . GO GO:0006413; P:translational initiation; TAS:Reactome; . GO GO:0019083; P:viral transcription; TAS:Reactome; . Gene3D 3.30.160.20; -; 1; . Gene3D 3.30.230.10; -; 1; . InterPro IPR014720; dsRBD_dom; . InterPro IPR000851; Ribosomal_S5; . InterPro IPR005324; Ribosomal_S5_C; . InterPro IPR020568; Ribosomal_S5_D2-typ_fold; . InterPro IPR014721; Ribosomal_S5_D2-typ_fold_subgr; . InterPro IPR005711; Ribosomal_S5_euk/arc; . InterPro IPR013810; Ribosomal_S5_N; . InterPro IPR018192; Ribosomal_S5_N_CS; . PANTHER PTHR13718; PTHR13718; 1; . Pfam PF00333; Ribosomal_S5; 1; . Pfam PF03719; Ribosomal_S5_C; 1; . SUPFAM SSF54211; SSF54211; 1; . TIGRFAMs TIGR01020; uS5_euk_arch; 1; . PROSITE PS00585; RIBOSOMAL_S5; 1; . PROSITE PS50881; S5_DSRBD; 1; .

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